Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRRIEKNDKPFFYLADTVWSAFTNIDLTDWAYYLKVRKEQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFD---LKAKNEAYFKHAEKMLEMAVNQGFTPALVLLW--CNYIPE----TWGAKFGTSPLF----RKEDIKPYTEMMLEH--------FEQF-EPI-YIISGDTDFPT----ETVTDYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNSEHQSMAYTLAEHFSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 3PZG Chain:A ((27-226)) | -----------------FRFIGSNNYYMHYK-SNRMIDSVLESARDMGIKVLRIWGFLDGESYCR-DKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -94794 for 1308 contacts (-72.5/contact) +
2D Compatibility (PS) -18554 + (NN) -8865 + (LL) 17184
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -112679.0 ( -86.15 by residue)
QMean score : 0.381
|
|
|