Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGDIKDQHFTDIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITFGDGALKATCLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLADQDRYQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHV-GLGTFRPVDVEDT--TNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAA--YNHAVEEQYRFF-----SFGDAMFIH |
| 4INO Chain:A ((1-302)) | QEVKVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFH-----TWDRVVGISDYAFKSDIVKATLKD--PERIKPMSSDHAAALNVELLKKLSPDLVVTFVGNPKAVEHAKKF-----------------GISFLSFQ-------------EKTIAE-VMEDIDTQAKALEVDASKKLAKMQETLDF-IAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPE---IIFIWWISPLSPEDVLNNPKFATIKAIKNKQVYKLPTM----------DIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13166 for 2383 contacts (-5.5/contact) +
2D Compatibility (PS) -29959 + (NN) 3951 + (LL) 3656
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -51318.0 ( -21.54 by residue)
QMean score : 0.230
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