Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSKGLENVYVAETSISSIIDD--MLTYVGYGIDDLMENNASFEEVIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSMLGVFDTEAE------------LDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYMITGEEADELSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPLHGGANERVFDMLEEIDQAGDVRNYIQEKIDT-KQKIMGFGHRVYRGGDPRAQHLREMSRKLTAEKGE-EKWFDISLQVEESV-----WELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSRVSGWLAHIFEQYRDNRLIRPRAIYVGPENRSYLPVEERI |
| 2IBP Chain:B ((25-409)) | -----GLEDVLIKSTSISDIDGEKGILWYRGYRIEELA-RLSTYEEVSYLILYGRLPTKRELEDYINRMKKYRELHPATVEVIR--NLAKAHPMFALEAAVAAEGAYDEDNQKLIEALSVGRYKAEEKELAYRIAEKLVAKMPTIVAYHYRFSRGLEVVRPRDDLGHAANFLYMMFGREPDPLASRGIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGANEMAVRNYLEIGTPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRDYVAKFGDPQNLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTPIFAMSRVVGWVAHVLEYWENNRIFRPRACYIGPHDLQYIPLEQR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203832 for 3066 contacts (-66.5/contact) +
2D Compatibility (PS) -39053 + (NN) -19802 + (LL) 1108
1D Compatibility (HY) -30800 + (ID) 7850
Total energy: -300229.0 ( -97.92 by residue)
QMean score : 0.542
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