Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREINHYYGEKPKKTSEPTKTVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKDRDKDRWTKKEEKAK
3CRA Chain:A ((146-234))
---------QKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVV--------DQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREV---------
General information:
TITO was launched using:
RESULT:
Template:
3CRA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2051 for 467 contacts (-4.4/contact) +
2D Compatibility (PS) -9316 + (NN) -5691 + (LL) 2348
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -17560.0 ( -37.60 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_3CRA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CRA-query.scw
PDB file :
Tito_Scwrl_3CRA.pdb
: