Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKVPASFNKWIEKVKTTFPENEKLHRMFEKCFTNTYTTTLQETEEGLPFVIT-----GDIPAMWLRDSTSQIRPYLIVAE---EDEEMATVIENLVKLQTKCI-LHDPYANAFNKSA-NGAGFQNDKTAMTNLVWE---RKYEIDSLCYPIQLAYLLWKS-------------TNRTGH--FTEEFRKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPSDDACMYGYLVPSNMFLVVVMDYVQEIAATFYPEDKELPKESSDLRKEVAAGIE---TYAKQVHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAATYLGF---------CEKTDPAYQATRKLILSR--E----N--------PYFVEGSVLTGIGSPHTPDHYVWPIALSI--EGLT-AE-----------------------------------------------T--------EAEKQAILEMLIAGDGGTDYMHEGVNASNPAEFTRDWFAWSNAMFSEFVLSLCGVYVKGSPLSK |
| 2FBA Chain:A ((16-489)) | ------TDLETFLDKQ-----KEVSLYYLLQNIAYPEG-Q--FNNGVPGTVIASPSTSNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSNPS-GSFDDENHKGLGEPKFN--TDGSAYTGAWGRPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLWEEN-------------------------------------QGRHFFTSLVQQKALAYAVDIAKSFD--DGDFANTLSSTASTLESYLSGSDGGFVNTDV---NHIVENPDLLQQN--SRQGLDSATYIGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLEDNKDRYSVNSAYSAGAAIGRYPEDVYNGDGS---SEGNPWFLATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSFLQVILDHINDDGSLNEQLNRYTGYSTGAYSLTWSSGALLEAIRLRNKVK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FBA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118011 for 3217 contacts (-36.7/contact) +
2D Compatibility (PS) -38534 + (NN) -16591 + (LL) 2152
1D Compatibility (HY) -800 + (ID) 2150
Total energy: -173934.0 ( -54.07 by residue)
QMean score : 0.345
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