Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLRKFQVKAFTVLESLIVLSVVAFMTLVFSTSFNNIFRQVEETIFFISFEHLYRDTQKLSAFGQKKQTLTISHNYLENTYERLYLPKTVKVVKSDTLAFDANGGNSSLAKIQFECYRKTVTYQLYIGSGNYRKKEN
2LQV Chain:A ((22-120))
ANNETSKSVTFPKCEDL---------------DAAGIAASVKRDYQQNRVARWADDQKIV---GQADPVAWVSLQDIQGKDDKWSVPLTVR-----------GKSADIHYQVSVDCKAGMAEYQRRLE---------
General information:
TITO was launched using:
RESULT:
Template:
2LQV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39418 for 560 contacts (-70.4/contact) +
2D Compatibility (PS) -10206 + (NN) 3554 + (LL) 3216
1D Compatibility (HY) 800 + (ID) 750
Total energy: -42804.0 ( -76.44 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_2LQV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LQV-query.scw
PDB file :
Tito_Scwrl_2LQV.pdb
: