Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSPEERYSSLRRFATEIRLNTLETLNHLGFGHYGGSLSIVETLAILYGDIMDINPEKFKESDRNYMVLSKGHAGPALYSTLYLKGF-FDKTFLHSLNTNGTKLPSHPDRNLTPGIDVTTGSLGQGISIATGIAYAQKIENSSY----------YTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVDDNKKQLDGLTADICNPGDFVAKFEAFGFDAVRVK--GDDIEAIDKAIKTFQDSNSVKPKCIVLDSIKGQGVKELEELASNHHLRPDLQQKTMLERAVISLRESLEVVE |
1TKC Chain:B ((11-251)) | ---------------STIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQ-MRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSIEDLKQFRQLGSRTPGHPEFEL-PGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATS-ISFDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSKD-KPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKSKFGFNPDKSFVVPQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104460 for 1910 contacts (-54.7/contact) +
2D Compatibility (PS) -25182 + (NN) -14868 + (LL) 1460
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -160650.0 ( -84.11 by residue)
QMean score : 0.520
|
|
|