Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
2K9I Chain:A ((9-51))
-----NGIKLGVYIPQEWHDRLMEIAKEKNLTLSDVCRLAIKEYLDNHDKQKK------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16942 for 201 contacts (-84.3/contact) +
2D Compatibility (PS) -4511 + (NN) -2096 + (LL) 4632
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -22617.0 ( -112.52 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2K9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K9I-query.scw
PDB file :
Tito_Scwrl_2K9I.pdb
: