Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIIAITEKVIKELFRDKRTLAMMFLAPILIMFLMNVMFSANSNTKVKIGTINVNTKVVSNLDNIKHIKVRSFKFNSSAKKALKSNKIDALISEDNKSYTLFYANTDSSKTTLTRQAFKTAVNTMNS--KELISQVKILANKNPKLAQSLQTRSKYIKEKYNYGNKNTGFFAKMIPILMGFMVFFFVFLISGMALLKERTSGTLDRLLATPVKRSDIVFGYMLSYGILAIIQTIVIVLSTIWLLDIQVVGSIFSVIIVNFILALVALSLGILMSTLAKSEFQMMQFIPLIIMPQLFFSGIIPLENMANWAQTVGKILPLSYSGDALTKIIMYGQGLSNVSSNLLVLLLFLIILTIANIFGLKRYRKV |
4BWD Chain:A ((9-69)) | -------------------------------------------------------------------------------------------------------VDAENQVELEEKTRLINQVMELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSAS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 11406 for 220 contacts (51.8/contact) +
2D Compatibility (PS) -6154 + (NN) -1258 + (LL) 28300
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 29844.0 ( 135.65 by residue)
QMean score : 0.429
|
|
|