Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYIEILGQNAKKASQSVARLSTASKNEILRDLARNIVADTETILTENARDVAKAKDNGISEIMVDRLRLNKDRIQAIANGIYQVADLAD-PIGQVVSGYTNLDGLKILKKRVPLGVIAMIFE-SRPNV-SVDAFSLAFKTGNAIILRGGKDAIFSNTALVNCMRQTLQDTGHNPDIVQLVEDTSHVVAEELMQATDYVDVLIPRGGAKLIQTVKEKS---KIPVIETGVGNVHIYIDEFADLDMAAKIVINAKTQR-PSVCNAAEGLVVHQAIAKGFLSQLEKMLKESNQSVEFRADEEA--------------------------------------LQLL--ENAVA---ASESDYATEFLDYIMSVKVVDSFEQAISWINKYSSHHSEAIITNNISRAEIFQDMVDAAAVYVNASTRFTDGFVFGLGAEIGISTQKLHARGPMGLEALTSTKYYINGTGQVRE |
| 3EK1 Chain:A ((70-503)) | -ATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKP----LAEAR-GE-------VLYAASFIEWFAEEAKRVYGDTIPA--PQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKA----GIPAGVLQIVTGKA-REIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKE----LKV-GNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGR----EGSKYGIEEYLETKYICSAYKR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169811 for 3327 contacts (-51.0/contact) +
2D Compatibility (PS) -41851 + (NN) -15364 + (LL) 1956
1D Compatibility (HY) -3600 + (ID) 3700
Total energy: -232370.0 ( -69.84 by residue)
QMean score : 0.461
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