Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MVNYPHQLIRKTT----------VTKSKKKKIDFA-NRGMS-FEA------AINATNDYY-LSHEL-----AVIHKKPTPVQIVKVD-Y-PKRSRAKI------VEAYFRQASTTDYSGVYKGYYIDFEAKE------TRQKTAMPMKNFHAHQIEHMANVLQQKGI--CFVLLHFSTLKETYLLPANEL------ISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLD---IIEEKLLGGDYN----------- |
| 3NO2 Chain:A ((3-276)) | SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTICPIRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24866 for 1386 contacts (-17.9/contact) +
2D Compatibility (PS) -20718 + (NN) 6069 + (LL) 208
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -46257.0 ( -33.37 by residue)
QMean score : 0.172
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