Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIG--LFCAAGFSTG-MLVNNMKIAADKEGIEAHIEAYSQGKIADYA-----KDLDVALLGPQVSYTLDKSKSICDEYGVPIAVIPMADYGMLDGVKVLKLALSLLETRKEA
2R4Q Chain:A ((170-268))
-AKILAVTACPTG--HTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQVEMERFK------GKRVLQVPVTA-GIRRPQELIEKAMNQ-------
General information:
TITO was launched using:
RESULT:
Template:
2R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27914 for 631 contacts (-44.2/contact) +
2D Compatibility (PS) -9122 + (NN) -2175 + (LL) 1532
1D Compatibility (HY) 3200 + (ID) 750
Total energy: -35229.0 ( -55.83 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_2R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4Q-query.scw
PDB file :
Tito_Scwrl_2R4Q.pdb
: