Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIELQERIKKLNIPFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQGKSSLAEKLHKELIWDLDGVKYDEG-----ISKRTALKKLEGKINEYTKKYSYLF-
1FLC Chain:B ((4-165))
--IDDLIIGV-----LFVAIVETGIGGYLLGSRKESGG-GVTKESAEKGFEKIGNDIQILKSSINIAIEKLNDRISHDEQAIRD-LTLEIENARSE--ALLGELGIIRALLVGNISIGLQESLWELASEITNRAGDLAVEVSPGCWIIDNNICDQSCQNFIFKFNETAPVPTI
General information:
TITO was launched using:
RESULT:
Template:
1FLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16177 for 839 contacts (19.3/contact) +
2D Compatibility (PS) -16467 + (NN) -2278 + (LL) 1256
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -9112.0 ( -10.86 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1FLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FLC-query.scw
PDB file :
Tito_Scwrl_1FLC.pdb
: