Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLGKLPDGIFTLLRFNDEGGQLTHISESEALWLTLELAPEKMDCI
1JDH Chain:B ((12-49))
---LGANDE----LISFKDEGEQEEKSSENSSA--ERDLADVKSSLV
General information:
TITO was launched using:
RESULT:
Template:
1JDH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3192 for 131 contacts (24.4/contact) +
2D Compatibility (PS) -3733 + (NN) 1157 + (LL) 1140
1D Compatibility (HY) -400 + (ID) 650
Total energy: 706.0 ( 5.39 by residue)
QMean score : 0.035
(partial model without unconserved sides chains):
PDB file :
Tito_1JDH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JDH-query.scw
PDB file :
Tito_Scwrl_1JDH.pdb
: