Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSG-------ENANVKNLFTGTRALNANFNDDKSSMVYYENEVANYIKKTNHHVRYRVTPLFKNVE-LVARGVRIEAQSIEDETISFDVYIFNGQPGYDIDYLTGSSEKIMITK |
| 3OWV Chain:A ((20-248)) | ------------------------------------------SEAPSQALAESVLTDAVKSQIKGSLEWNGSGAFIVNGNKTNLDAKVSS-KPYADNKTKTVGKETVPTVANALLSKATRQY-------SWTPPGWHQVKNL-KGSYTHAVDRGALLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQ-NKRVRYRVTLYYASNEDLVPSASQIEAKS-SDGELEFNVLVPNVQKGLQLDYRTGEVTVTQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19507 for 1787 contacts (10.9/contact) +
2D Compatibility (PS) -22050 + (NN) -625 + (LL) 5604
1D Compatibility (HY) -3600 + (ID) 2950
Total energy: -4114.0 ( -2.30 by residue)
QMean score : 0.262
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