Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEKYGVPRDIYAKVKIIGLVIADIVFVGGSAVAALSIGTRIFPTNQWPQLVAFMILTPLMCLYLVLPTNGGKKNWHSMFLFFRRRRKRYISLNYQRRENR
1Q0V Chain:A ((249-329))
MDRDYSTPEDEEELIRKAIELSLKESRNSASSEPIVPVVESKNEVKRQE------------------IEEEEDPDLKAAIQESLREAEEAKLRSERQKA--
General information:
TITO was launched using:
RESULT:
Template:
1Q0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1229 for 267 contacts (-4.6/contact) +
2D Compatibility (PS) -8726 + (NN) -3507 + (LL) 2536
1D Compatibility (HY) 6000 + (ID) 350
Total energy: -5276.0 ( -19.76 by residue)
QMean score : -0.070
(partial model without unconserved sides chains):
PDB file :
Tito_1Q0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q0V-query.scw
PDB file :
Tito_Scwrl_1Q0V.pdb
: