Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAER----DYFASEGESD--------PERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
2OFK Chain:A ((94-169))
---------------AIISNARAWLAM--EQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTTICYSFMQACGLVN
General information:
TITO was launched using:
RESULT:
Template:
2OFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16526 for 375 contacts (-44.1/contact) +
2D Compatibility (PS) -6805 + (NN) -3819 + (LL) 916
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -30284.0 ( -80.76 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2OFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OFK-query.scw
PDB file :
Tito_Scwrl_2OFK.pdb
: