Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGPNLTKKVTDKSNYYKTEVSTVF-STLELSDALGKP--RKVVAVADAGFSKKMRTLMA
1T0K Chain:B ((9-104))
-----SINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTLA-
General information:
TITO was launched using:
RESULT:
Template:
1T0K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48938 for 699 contacts (-70.0/contact) +
2D Compatibility (PS) -10004 + (NN) -2705 + (LL) 332
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -66415.0 ( -95.01 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1T0K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0K-query.scw
PDB file :
Tito_Scwrl_1T0K.pdb
: