Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHITFDYSKVL----GQFVGEHELDYLQPQVSAADAFLRQGTGPGSDFLGWMDLPENYDKEEFSRIQKAAEKIKSDSEVLVVIGIGGSYLGAKAAIDFLNNHFANLQT-AEERKAPQILYAGNSISSTYLADLVEYVQDKEFSVNVISKSGTTTEPAIAFRVFKELLVKKYGQEEANKRIYATTDKVKGAVKVEADANNWETFVVPDNVGGRFSVLTAVGLLPIAASGADITALMEGANAARKDLSSDKI-SENIAYQYAAVRNVLYRKGYITEILANYEPSLQYFGEWWKQLAGESEGKDQ--------KGIYPTSANFSTDLHSLGQFIQEGYRNLFETVVRVEKPRKNVTIPELTEDLDGLGYLQGKDVDFVNKKATDGVLLAHTDGGVPNMFVTLPTQDAYTLGYTIYFFELAIGLSGYLNSVNPFDQPGVEAYKRNMFALLGKPGFEELSAELNARL |
| 2Q8N Chain:A ((13-455)) | -MSLKFDFSNLFEPNISGGLTDEDVKSVEEKVTSAVRNFVE------NTPDFAKLDRS----WIDSVKSLEDWI-INFDTVVVLGIGGSGLGNLALHYSLRPLNWNEMTREERNGYARVFVV-DNVDPDLMSSVLDRIDPKTTLFNVISKSGSTAEVMATYSIARGILEA-YGL-DPREHMLITTDPEKGFLRKLVKEEGFRSLEVPPGVGGRFSVLTPVGLLSAMAEGIDIDELHEGAKDAFEKS-MKENILENPAAMIALTHYLYLNKGKSISVMMAYSNRMIYLVDWYRQLWAESLGKRYNLKGEEVFTGQTPVKALGATDQHSQIQLYNEGPNDKVITFLRVENFDREIVIPETG--RAELSYLARKKLSELLLAEQTGTEEALRENNRPNMRVTFDGLTPYNVGQFFAYYEAATAFMGYLLEINPFDQPGVELGKKITFALMGREGYTYEIKERSKKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176879 for 3578 contacts (-49.4/contact) +
2D Compatibility (PS) -47097 + (NN) -22044 + (LL) -180
1D Compatibility (HY) -18400 + (ID) 6450
Total energy: -271050.0 ( -75.75 by residue)
QMean score : 0.429
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