Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKTDTPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKKRVQSFDEMTNISKDFIALLNE-NFVVNPLKQRIVQESADGTVKYLFELPDGMLIE-TVLMRQYYGLSVCVTTQVGCNIGCTFCASGLIKKQ------RDLNNGEITAQIMLVQKY-FDERG---------QGERVSHIVVMGIGEPFDNYTNVLKFLRTVNDDNGLAIGARHITVSTSGLAH-KIRE-FANE-GVQVNLAVSLHAPNNELRSSIMRINRSFPLEKLFAAIEYYIETTNRRVTFEYIMLNGVNDTPENAQELADLTKKIRKLS-YVNLIPYNPVSEH---DQYSRSPKERVEAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAKVGR |
| 2YX0 Chain:A ((11-304)) | -----------------------------------------------KITVQANPNMPKEVAELFRKQHYEIVGRH--SGVKLCHWLKKSLT--EGRFCYKQKFYGIHSHRCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPMLY-PYMGDLVEEF-HKRGF-----TTFIVTNGTIPERLEEMIKEDKL-PTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRD-LPTRTVVRLTLVKGE--NMHSPEKYAKLILK--ARPMFVEAKAYM-----NRLTINNMPSHQDIREFAEALVKHLPGYHIEDEYEPSRVVLIMRDDVDPQGTGVEGRFIKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123039 for 2116 contacts (-58.1/contact) +
2D Compatibility (PS) -28157 + (NN) -11102 + (LL) 4868
1D Compatibility (HY) -3600 + (ID) 1900
Total energy: -162930.0 ( -77.00 by residue)
QMean score : 0.356
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