Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSKREIEQLCQVIPEIKKSLPLEICLTAGFLDREQLHQLKQAGIDRINHNLNTPEENYPNIATTHSFKDRCDTLERIHNEDIDVCSGFI-------C---GMGE-SDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAGREVHFENFESLVT-LLVDSTFLGNYLTEGGRNQHTDIEFLEKLQLNHTKKELI |
1THF Chain:D ((28-250)) | -------------------------------------------------------------------------------------------DSGDPVELGKFYSEIGIDELVFL-DITASV-EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVEN----------PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD-GTKS----GYDTE----MIRFVRPLT-TLPIIASGGAGK--MEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVRLEGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1THF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128294 for 1719 contacts (-74.6/contact) +
2D Compatibility (PS) -23139 + (NN) -13340 + (LL) 7624
1D Compatibility (HY) -400 + (ID) 1150
Total energy: -158699.0 ( -92.32 by residue)
QMean score : 0.416
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