Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTL-MQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAIIK--KEGRLGIYYYEQGFSVRTNKVIYDRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQEAREQLSPLLGLLDVCFGLEPIYLAGESEDLKDELGLSRPYLDIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNN-MLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKETPQRALEIAMATFKYKHTIQGDINIMTR-DDIAYLIEKETNDIKR |
| 2QCV Chain:A ((11-328)) | EFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPE-ECSILMYRQDVADLYLSPEEVNEA-YIRRSKLLLVSGTALSKSPS-REAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTRE--------EFDVLENRTEK----GDNDETIRYLFKH-SPE-----LIVIKHGVEG---SFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIVVSK-----AMPSVEEIEALIEKDETITIA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136868 for 2788 contacts (-49.1/contact) +
2D Compatibility (PS) -33230 + (NN) -9217 + (LL) 2428
1D Compatibility (HY) -7200 + (ID) 2600
Total energy: -186687.0 ( -66.96 by residue)
QMean score : 0.424
|
|
|