Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKLGRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFD------------------------------ETVSKKMDPVNGELS------LPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDG-KSFKESAHPSEYGSIDMYEVIKLC----HEFGFEGA-----IRPDHGRMIWGETGR---PGYGLYDRALGATYLSGLYEAVIKGSK |
4EAC Chain:D ((21-410)) | MEQTWRWYGPNDPVSLADVRQAGAT-GVVTALHHIPNGEVWSVEEILKRKAIIEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAERFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYGVRADNDLVDMIKQFGP--RIYFTHLRSTMREDNPKTFHEAAHLN--GDVDMYEVVKAIVEEEHRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166337 for 2780 contacts (-59.8/contact) +
2D Compatibility (PS) -36976 + (NN) -18628 + (LL) 360
1D Compatibility (HY) -25200 + (ID) 7750
Total energy: -254531.0 ( -91.56 by residue)
QMean score : 0.523
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