Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSY-----SHPERIRQLVAEIELADQVGLDVYGIGEHHREDFAVSAPEIVLAAGAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGY--DLADYDDLFNEKMDMLLAINSATNLDWKGH-LTQTVNERPIYPRALQ-RQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAIDRYFFPTKQTVDNIAK--------GRPHWSE----MTKEQYLRS---VGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 1NQK Chain:A ((2-354)) | SLNMFWFLPTHG-----DGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSC----EDAWLVAASMIPVTQRLKFLVA-LRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHV--RGAKLLFPAIQQPYPPLYFGGS-SDVAQELAAEQVDLYLTWGE--PPELVKEKIEQVRAKAAAHGRK---IRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFAR-------DNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAA-LGIDSFVLSG----YP---HLEEAYRVGELLFPLLDVAIPEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139428 for 2656 contacts (-52.5/contact) +
2D Compatibility (PS) -32586 + (NN) -5767 + (LL) 1128
1D Compatibility (HY) -2400 + (ID) 2850
Total energy: -181903.0 ( -68.49 by residue)
QMean score : 0.421
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