Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIILTATAESIEQVKQLLAIGIDRIYVGEENYGLRL------PHSFSDDELREIAKLVHDAGKELTVACNALMH-----QEMMDNIKPFLELMKEINVDYLVVGDA----------GVFYINKRDGYNFKLIY----DTSVFVTSSRQVNFWGQHGAVETVLAREIPSEELFKMSENLEFPAEILVYGASVIHHSKRPLLQNYYNFTHITDEKTRERGLFLAEPGDPESHYSIYEDKHGTHIFINNDINMMTKVTELVEHHFTHWKLDGIYCPGDNFVAIAEIFVETARLIENGTFTQDQAFLFDERIRKLHPKGRGLDTGFYDFDPSTVK |
| 1YDO Chain:A ((76-232)) | ----TYAALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTA--LQ-MGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFKS------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57643 for 954 contacts (-60.4/contact) +
2D Compatibility (PS) -14012 + (NN) -4029 + (LL) 7780
1D Compatibility (HY) 1600 + (ID) 800
Total energy: -67104.0 ( -70.34 by residue)
QMean score : 0.186
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