Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRRIKPIVVAVFFSLFGLLLIIGHLHSTNTLKKELVEAKKTIPSVKASKVPQKSTSSKDKEFVLKPIIDVSGWQLPKEIDYDTLS-KNISCVVIRVFGGSKISKTNNAAYTTGIDKSFKTHIKEFQKRNIPVAVYSYALGSSVKEMKEEAQIFYKNAAPYK---PTF-YWIDVEEETM---------SNMNKGVQAFRKELKRLGAKNVGIYIGTYFMTEQGIS---VKGFDAVWIPTYGSDSGYYEAAPQTELKYDLHQYTSQGYLPGFNQPLDLNQIAVNKDKKKTYEKLFGKVKE |
| 2X8R Chain:A ((2-209)) | ---------------------------------------------------------------TTVQGFDISNHQK--SVNFEAAKKDGAQFVMIKATEGTTY-----------KDTVFNSHYTGATKAGLLRGGYHFARPDK-STGSTQAKFFLKNGGGWSDDNRTLPGMLDIEYNPYGATCYGLSHSQMVAWIHDFVNEYHHATSRWPMIYTTADWWNRCTGNAKGFGDKCPLVLAAYSSSPPKT--IPGDWKTWTIWQNSDKYKHGG-----DSDKFNGPMT---QLRKLASG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91078 for 1620 contacts (-56.2/contact) +
2D Compatibility (PS) -20181 + (NN) -7319 + (LL) 6448
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -117780.0 ( -72.70 by residue)
QMean score : 0.368
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