Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLP--EELIAQTPLEK-RDASKLLVIDHKNKTMTDSHFDHILDELKPGDALVMNNTRVLPARL---------------YGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKV-SFGDGRLIATVTKELEHGGRIVEFS--------------------------YDGIFLEVLESLG-EMPLPPYIHEKLEDRDRYQTVYAKENGSAA-----APTAGLHF---TKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVG-----TTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 1WKV Chain:A ((2-383)) | -ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGNPRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGEMVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLEEAMEAVVEVARSDG-LVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFK------YLSLVQNALE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43764 for 2605 contacts (-16.8/contact) +
2D Compatibility (PS) -33374 + (NN) 3662 + (LL) 1896
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: -76330.0 ( -29.30 by residue)
QMean score : 0.112
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