Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITTLILASSLLLVATTSVKADDNFEMPTRYVKMSEKSKAFYQRLQEKQRKAHTTVKTFNNSEIRHQLPLKQEKARNDIYNLGILISQESKGFIQRIDNA---------------YSLENVSDIVNEAQALYKRNYDLFEKIKSTRDKVQVLLASHQDNTDLKNFYAELDDMYEHVYLNESRVEAINRNIQKYN |
2LR2 Chain:A ((29-82)) | --------------------------------------------------------------------------------ILHLPNLNEEQRNAFIQSLKDDSYIDTNNDGAYEGDELSGSQSANLLAEAKKLNDAQAPK-------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16160 for 212 contacts (-76.2/contact) +
2D Compatibility (PS) -3907 + (NN) 2801 + (LL) 10924
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -9242.0 ( -43.59 by residue)
QMean score : 0.415
|
|
|