Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKKIAGIGLASIAVLSLAACGHRGASKSGGKSDSLKVAMVTDTGGVDDKSFNQSGWEGMQAWGKKNGLKKGAGFDYFQSA-SESDYATNLDTAVSSGYKLIFGIGFSLHD-AIDKAADNNKDVNYVIVDDVIKGKDNVASVVFADNESAYLAGIAAAKTTKTKTVGFVGGMES-EVITRFEKGFEAGVKSVDKSIKIKVDYAGSFGDAAKGKTIAAAQYASGADIVYQVAGGTGAGVFSEAKSRNESLKEADKVWVLGVDRDQAAEGKYTSKDGKASNFVLASSIKEVGKSVELIATKTSKGKFPGGNVTTYGLKDGGVDIATTNLSDDAVKAIKEAKAKIISGDIKVPSK |
| 2O20 Chain:A ((62-308)) | ---------------------------------RTTTVGVIL-P-TI-TSTYFAAITRGVDDIASMYKYN----MILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSL--KNSRTPVVLVGTIDG-DKEIPSVNIDYHLAAYQSTKKLIDSG-NKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEGNY-SYEQGKALAERLLERGATSAVVSHDTVAVGLLSAMMDKGVK--VPEDFEIISGANSPITQY---------TYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLVLDHEIFSRRSTK------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61240 for 2027 contacts (-30.2/contact) +
2D Compatibility (PS) -26282 + (NN) -8503 + (LL) 1684
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -103141.0 ( -50.88 by residue)
QMean score : 0.417
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