Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLID-----YGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKA----FSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH----K-AHDYEEVLEELKSWLIDK-SSSKE------PL-VQPTLS--SFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKSPNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKDFNEFATFPTIEEANHYQLTPEQKAKIKS-NRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 3RAO Chain:A ((22-358)) | VEYGFWLPIFGGWLRNVNDESMPPTFEYAKQTAQAAEQLGFSTTLIAELNLNDIKGVSAPSLEAWTTAAALAAVTDRLEIMTAVR-PGFHNPAVTAKMAANIDQLSNGRFTLNVVSAWWEE-EAKQYGGVFTAHDERYDRTEEFVTILKGLWKEEEFSYKGNFYELHHTHLSPKPVQKQGIKLYAGGESKRGKEVIVNHADAYVMHGG---TVE---EVSVKIEDMKNRRKKVTEEPLQSFGLAAYVICRHTEEEALEEWRRITDVK-----------FVSKSQLE-QQVKLNDY-SVSNRGLRPNLIGTPEQIAERILAFEK-VGVTLLLLQFSP-----QLEEMKRFSEKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111741 for 2427 contacts (-46.0/contact) +
2D Compatibility (PS) -32750 + (NN) -13469 + (LL) 1196
1D Compatibility (HY) -2000 + (ID) 2150
Total energy: -160914.0 ( -66.30 by residue)
QMean score : 0.523
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