Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKK----GIGDFPKTEKGNSLIVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK |
1J27 Chain:A ((1-98)) | MKAYLGLYTARLETPARSLKEKRALIKPALERLKARFPVSAARLYGLDAWGYEVVGFTLLGNDPAWVEETMRAAARFLAEAGGFQVALEEFRLEAFEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9317 for 626 contacts (14.9/contact) +
2D Compatibility (PS) -9723 + (NN) -732 + (LL) 476
1D Compatibility (HY) 800 + (ID) 550
Total energy: -412.0 ( -0.66 by residue)
QMean score : 0.163
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