Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQTLRRLDVKKQFIEKIEPFAHRQTLKSKAVNSSKTTMSIQRYNHSGTKIQLRIGYSKVLIRIFSNGKINLTHYDLFFDREETLEITDAFDNGVYTQDEVDGFIKQAKTFIKQALKGEV
1RM1 Chain:A ((102-124))
---------------------------------------------------VIMRIREPKTTALIFASGKMVVT-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1RM1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10578 for 97 contacts (-109.1/contact) +
2D Compatibility (PS) -2668 + (NN) -2456 + (LL) 7120
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -10182.0 ( -104.97 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1RM1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RM1-query.scw
PDB file :
Tito_Scwrl_1RM1.pdb
: