Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSAN----IGP---GFDSIG---VALSKYLSIEVLE-ESTEWLVEHNL-VNIPKDHTNLLIQTALHVKSD---LAPHRLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLEGHPDNVAPAIFGDLVISSIVKNDIKSLEVMF-PDSSFIAFIPNYELKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQPLVKEFGVIKQISTQNGAYATYLSGAGPTVMVLCSKE-KEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
| 3PYF Chain:A ((6-300)) | VTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGS---DVPFALHGGTALGTGRGEE--LATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGD-PPRLGEPGPVLAALAAGDPDQLAPLLGNEM--QAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115379 for 2444 contacts (-47.2/contact) +
2D Compatibility (PS) -29948 + (NN) -2756 + (LL) 580
1D Compatibility (HY) -4000 + (ID) 2750
Total energy: -154253.0 ( -63.11 by residue)
QMean score : 0.390
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