Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLFLSLERKFKAASDKEVSKQQEAYLRHHFKCYGIKSPERRMLYKELIKAAKRQAKIDWQLLDKCWQSDYREYHHFVLDYLLAMSQFLTYNDCSRLEFYARHQQWWDSIDVLTKIFGNLSLKDDKVMNLLSEWSLDQDFWMRRLAIEHQLGFKEKT--NTDILSLFILRNTGSQEFFINKAIGWALRDYSKYNKVWVKDFISNHYDELSTLSIREGSKYL |
2DB0 Chain:A ((149-214)) | ----------------------------------------------------------------------------------------------------------------------------------FMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVIKRLEELNDTSSLVNKTVKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20119 for 401 contacts (-50.2/contact) +
2D Compatibility (PS) -6953 + (NN) -5100 + (LL) 11112
1D Compatibility (HY) 400 + (ID) 300
Total energy: -20960.0 ( -52.27 by residue)
QMean score : 0.390
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