Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKGLKSLYTLLGLISLTLLGFVAVISKQHIYLPSFNWLDWDFNLPSPIDVGMYHYFFWGALVLFVIVLLAILVVLFYPRRYTEYKLADKTGKLMLKKSAIEGFVKTEVLKTGLMKSL-SVTAHLYKKKVKVDVKGLLTSRTNVPEQLEHIQSDVELGLKEFFGLEKKMNTRVFVKQVEEENVGNAKTNKSRVE |
| 3W61 Chain:A ((9-82)) | ------------------------------------------------------------------------------------------------------NRIVEAAERVPGVRGVIHLRARYVGQDIWADMIIGVDPENTVEQ-AHEICEAVQAAVCGKIRR--IESLAVSAEARE--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21539 for 496 contacts (-43.4/contact) +
2D Compatibility (PS) -7803 + (NN) 1110 + (LL) 9916
1D Compatibility (HY) -400 + (ID) 350
Total energy: -19066.0 ( -38.44 by residue)
QMean score : 0.389
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