Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKD---IDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVISADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVVAGCAFLVELDGLNGRKAIEGYDTKVLMNFPG
1ZN8 Chain:B ((9-168))
--VEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQYE-
General information:
TITO was launched using:
RESULT:
Template:
1ZN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143107 for 1197 contacts (-119.6/contact) +
2D Compatibility (PS) -16606 + (NN) -1563 + (LL) 236
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -179090.0 ( -149.62 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1ZN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZN8-query.scw
PDB file :
Tito_Scwrl_1ZN8.pdb
: