Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIYLGKNTKRNQRLLTFLDSYEIAYTCKESG--DINREVLQSLFSKTSDCFDLL-SPSFLRFKRQ----NQMTLSELMNLVLRNPDQNIRLPLVIDKDKVYPDMGVEEARVFIPRRLKVTFFRDSLFCDKEQR
1Z3E Chain:A ((2-119))
MVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPG-LLRRPIIIDEKRLQVGYNEDEIRRFLPRKV----------------
General information:
TITO was launched using:
RESULT:
Template:
1Z3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64450 for 738 contacts (-87.3/contact) +
2D Compatibility (PS) -11835 + (NN) -6519 + (LL) 1364
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -87840.0 ( -119.02 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_1Z3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z3E-query.scw
PDB file :
Tito_Scwrl_1Z3E.pdb
: