Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKVQTGGKLYIAGEYAILYPGQVAILKNIPIYMTALATFADNYSLY--SDMFNYT--A-----SL---QPDKQYSLIQETILLMEEWLINFGKNIKPIHLEITGKLERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKR-GDNGSMGDIACIAYEHLISYSAFDRR-AVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQPSIS------------KEMINIVKSTIT--------QR-------------FLDD----T--NYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHPSIYTDKLQKLKEASKG-LD-IVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS |
| 1PIE Chain:A ((49-392)) | -EYFFSPGRINLIGEHT-DYNGGYVFPASITIGTTGLARLREDKKVKLYSENFPKLGVIEFDLDEVEKKDGELWSNYVKGMIVMLKGA---GYEIDKGFELLIKGEIPTA---SGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVP------------------VEL-RDYDIVIMNTNKPRALTESKYNERFAETREALKRMQTRLDIQSLGELSNEEFDANTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGNLTKFGELLNASHASLKDDYE-VTGLELDTLAETAQKQAGVLGARMTGAGFGGCAIALVAHDN-VSAFRKAVGQVYEEVVGYPASF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157750 for 2424 contacts (-65.1/contact) +
2D Compatibility (PS) -30714 + (NN) -13245 + (LL) 2240
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -208519.0 ( -86.02 by residue)
QMean score : 0.445
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