Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETNIYGDYGRYLPLILEDFSQRIQLENDKAKVETGYKLYEHIIGR-IKTSDSMIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE
1K8K Chain:F ((2-167))-----TATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIA-----------------VKQADEIEKILCHKFMRFMMMRA-ENFFILRR----------KPVEGYDISFLIT----------NFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKN


General information:
TITO was launched using:
RESULT:

Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19888 for 1123 contacts (-17.7/contact) +
2D Compatibility (PS) -17162 + (NN) 57 + (LL) 3188
1D Compatibility (HY) -8000 + (ID) 950
Total energy: -42755.0 ( -38.07 by residue)
QMean score : 0.189

(partial model without unconserved sides chains):
PDB file : Tito_1K8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1K8K-query.scw
PDB file : Tito_Scwrl_1K8K.pdb: