Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METNIYGDYGRYLPLILEDFSQRIQLENDKAKVETGYKLYEHIIGR-IKTSDSMIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE |
1K8K Chain:F ((2-167)) | -----TATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIA-----------------VKQADEIEKILCHKFMRFMMMRA-ENFFILRR----------KPVEGYDISFLIT----------NFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19888 for 1123 contacts (-17.7/contact) +
2D Compatibility (PS) -17162 + (NN) 57 + (LL) 3188
1D Compatibility (HY) -8000 + (ID) 950
Total energy: -42755.0 ( -38.07 by residue)
QMean score : 0.189
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