Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFA-KGAT-FKKEYLDSAITAGLSFYVSEIDYG---AD------IPVILVN--DIKKAMS---------LISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKVNHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLMEN---SNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSE-N-VITESQAFSFHVKGKLEN-TYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIA-QTTVPGRMEVLTQTNGAKIFVD-YAHNGDSLKKLLAVVEEHQKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIAS-HINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
3LK7 Chain:A ((28-449)) | --------------------------------------------LAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLV-----SESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGN-------------IGFPAS-EVVQA-----ANDKDTLVMELSSFQLM--GVKEFRPHIAVITNLMPTHLD--YHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTTK-ATIVPFSTTEKVDGAYVQ--DKQLFYKGENIMSVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFD---NTKVILIAGG-LDRGNEFDELIPDI-T--GLKHMVVLGESA-----SRVKRAAQKAGV--TYSDALDVRDAVHKAYEVAQ-QGDVILLSPANASW-DMYKNFEVRGDEFIDTFESLRGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170209 for 3283 contacts (-51.8/contact) +
2D Compatibility (PS) -41686 + (NN) -10075 + (LL) 5680
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -231240.0 ( -70.44 by residue)
QMean score : 0.401
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