Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVHITSIYGQSPRSIALISQKLVKDVGRQLGYDEMGIYFYNDHAETHGERSTRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAY-GARIITFVHDIVPLMFESN----FYL--------LDRVIDMYNRSDVVILPTKAMHDYLIEKG-MTTSKVLYQEVWDHPVNIDL-----------------PRPECQKVLSFAGDIQR-FP----FVNDWK--------ENIPLIYYGDGSRL---------NSEANVHA-QGWKDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVET--LEEAVEKINNMEK---ETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR |
| 3FRO Chain:A ((121-428)) | --------------------------------------------------------------PLPDVVHFHDWHTV---FAGAL---IKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG-SVDFVIIP-----------SYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA-----MSFSWEKSAERYVKAYT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148119 for 1866 contacts (-79.4/contact) +
2D Compatibility (PS) -27268 + (NN) -17839 + (LL) 5788
1D Compatibility (HY) 0 + (ID) 1800
Total energy: -189238.0 ( -101.41 by residue)
QMean score : 0.392
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