Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANASLRHQLFEKLDQKCDQMVAIRRYLHENPELSFKETKTAAYISDFYKGKDCHVQTQFGGMNGVVVDIYGDKATDKPIKHIALRADFDALPIQEETGLSFASKTAGVMHACGH-D--AHTAYLLILAESLIELKSEFSGHIRILHQPAEEVPPGGAKAMIEAGCLDGIDAVLGIHVMSTMEEGTVQYHAGPIQTGRATFKVILQGKGGHGSMPHRANDTIVAASSFVIAAQTIVSRRVNPFDTAVVTIGSFDGKGSANVIKDSVTLEGDVRVMSEETRGVVEEEFKRILDGIAQTYGVSYQLDYQNDYPVLVNNSEVTQKVANSLKSVAIKEILDVIDCDPQTPSEDFAYYAQTIPACFFYVGAHEEGQPYYPHHHPKFQIAESSLMVSAKSMATAALAMLEEGE
1YSJ Chain:A ((26-403))------------ADKAFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQR---RAELKGTVRFIFQPAEEIA-AGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGK--------NSIDPIAAAGQIISG-----------LQNAVVSITRVQAGTSWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAARL--GY-Q-TVHAEQSPGGEDFALYQEKIPGFFVWMGTNGT----EEWHHPAFTLDEEALTVASQYFAELAVIVLETI-


General information:
TITO was launched using:
RESULT:

Template: 1YSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181607 for 3065 contacts (-59.3/contact) +
2D Compatibility (PS) -38560 + (NN) -17210 + (LL) 2716
1D Compatibility (HY) -22000 + (ID) 5900
Total energy: -262561.0 ( -85.66 by residue)
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_1YSJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YSJ-query.scw
PDB file : Tito_Scwrl_1YSJ.pdb: