Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDITTKQI-SF---HEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIEGGIPVVSIPGASAGITALIASGLAPQP------HIFYGFLPRKKGQQITFFETKKDYPETQIFYESPFRVSDTLKHMKEI-YG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
| 1S4D Chain:A ((6-253)) | ----FAGLPALEKGSVWLVGAGPGDPGLLTLHAANALRQADVIVHDA-LVNEDCLKLARPGAVLEFAGKRGPSPKQRDISLRLVELARAGNRVLRLK-GGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHD------RINWQGIASGSPVIVMYMAMKHIGAITANLIAGGRSPDEPVAFVCNAATPQQAVLETTLARAEADVAAAGLEPPAIVVVGEVVRLRAALDWIGALDGRKLAADP------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106543 for 1917 contacts (-55.6/contact) +
2D Compatibility (PS) -24834 + (NN) -12099 + (LL) 3044
1D Compatibility (HY) -2400 + (ID) 1800
Total energy: -144632.0 ( -75.45 by residue)
QMean score : 0.416
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