Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRINKYIAHAGIASRRKAEELIKQGMVTINGQVVNELATKVKAGDLVEIEGSPIY-NEEKVYYLLNKPRGVISSVSDDKGRKTVIDLLPQ-VKERIYPVGRLDWDTTGLLILTNDGDFTDKMIHPRNEIDKVYLARIKGIATKENLRPLTRGVVIDG----KKTKPARYNIIKVDHEKNRSVVELTIHEGRNHQVKKMFEQVGLLVDKLSRTQFGTLDLT-GLRPGEARRLNKKEISQLHNAAINKS |
| 1KSK Chain:A ((4-233)) | MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPD-HPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEV--I------TPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75807 for 1561 contacts (-48.6/contact) +
2D Compatibility (PS) -23441 + (NN) -4108 + (LL) 784
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -122522.0 ( -78.49 by residue)
QMean score : 0.559
|
|
|