Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAFTS-SKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGI-SSLEHCAKLHFANTKKAQALLK |
1I39 Chain:A ((1-200)) | ---------------------------------------------------------------------------------MKAGIDEAGKGCVIGPLVVAGVACSDE--DRLRKLGVKDSKKLSQGRREELAEEIRKICRTEVLKVSPENLDERMA-A--KTINEILKECYAEIILRLK-----PEIAYVDSPDVIPERLSRELEEIT---GLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLRQK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76236 for 1604 contacts (-47.5/contact) +
2D Compatibility (PS) -21828 + (NN) -12061 + (LL) 6296
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: -111829.0 ( -69.72 by residue)
QMean score : 0.517
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