Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEITWTVKYITEFIATAFLIILGNGAVANVDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL |
| 3IYZ Chain:A ((31-252)) | --TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-N-PLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG--------GLGVTTVHGN-L-------TAGHGLLVELIITFQLVFTIFASCDDKRTD--------------------------VTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG--------------NWENHWIYWVGPIIGAVLAGALYEYVFC |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2686322 for 19110 contacts (-140.6/contact) +
2D Compatibility (PS) -19107 + (NN) 9257 + (LL) 3568
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -2696554.0 ( -141.11 by residue)
QMean score : ?
|
|
|