Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNVKDITRESWILSTFPEWGTWLNEEIEEEVVADGNFAMWWLGN------CGVWIKTPGGANVVMDLWSNRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVIDPFAINELDYYLVSHFHSDHIDINTAAAIINNPNLDHVKFVGPYECGEIWKKWG-----------VP-------EERIIVIKPGESFEFKDIKVTAVESFDRTCLVTLPVDGAEEHDGELAGLAVTDEEMARKAVNYIFETPGGTIYHGADSHFSNYF--A--KHGKDYKIDVAINNYGDNPV-GIQDKMTSIDLLRMAEN---LRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPQDKDRIEYHHPRGFDDCFEQESNIQFKALL |
| 3IEK Chain:A ((1-224)) | -------------------------------------MRIVPFGAAREVTGSAHLLLAG-GRRVLLDCGMFQGKE-----------------EAR------NHAPFG---FDPKEVDAVLLTHAHLDHV--GRLPKLFREG--YRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHL-----------------------------PGSAFVVAQGEGRTLVYSGDLGNREKDVLPDPSLPP--LADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGHRLPRAPIYLDSPMAGRVLSLYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110489 for 1417 contacts (-78.0/contact) +
2D Compatibility (PS) -21739 + (NN) -11635 + (LL) 6272
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -144241.0 ( -101.79 by residue)
QMean score : 0.404
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