Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIVLAGTIGAGKSSLAAALGQHLGTDVFYEAVDNNPVLDLYYQDPKKYAFLLQIFFLNKRFQSIKEAYKANNNVLDRSIFEDELFLTLNYKNGNVTKTELDIYKELLANMLEELEGMPKKRP--DLLVYIDVSFDKMLERIDKRGRS---------FEQVDSNPELYDYYKQVHSEYPEWY--ENYDVSPKIRIDGNKLDFVKNPEDLQHVLDTIDSELQKLDLL
2JAS Chain:C ((2-201))
MKIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARSKQLKQAKNLENIIFDRTLLEDPIFMKVNYDLNNVDQTDYNTYIDFYNNVVLENL------LSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLNKNYE--EFYKQNVYDFPFFVVDAELDVKTQIELIMNKLNS------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54489 for 1307 contacts (-41.7/contact) +
2D Compatibility (PS) -19557 + (NN) -10158 + (LL) 2156
1D Compatibility (HY) -17200 + (ID) 3350
Total energy: -102598.0 ( -78.50 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2JAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JAS-query.scw
PDB file :
Tito_Scwrl_2JAS.pdb
: