Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITAKLVKELREKSGAGVMDAKKALVETDGDLDKAIELLREKGMAKAAKKADRVAAEGLTGVYVDGNVAAVIEVNAETDFVAKNDQFVTLVNETAKVIAEGRPSNNEEALALTMPSGETLEQAFVTATATIGEKISFRRFALVEKTDEQHFGAYQHNGGRIGVITVVEGGDDALAKQVSMHVAAMKPTVLSYTELDAQFVHDELAQLNHKIEQDNESRAMVNKPALPFLKYGSKAQLTDEVIAQAEEDIKAELAAEGKPEKIWDKIVPGKMDRFMLDNTKVDQEYTLLAQVYIMDDSKTVEAYLESVNAKAVAFVRFEVGEGIEKASNDFEAEVAATMAAALEK |
| 4PC1 Chain:D ((2-277)) | --EITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKA-------QFEEERVALVAKIGENINIRRVAALEG---DVLGSYQH-GARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEY---------------------------------------QVQLDIAMQ---SGKPKEIAEKMVEGRMKKFT-------GEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96886 for 2114 contacts (-45.8/contact) +
2D Compatibility (PS) -30572 + (NN) -17252 + (LL) 5008
1D Compatibility (HY) -16800 + (ID) 6450
Total energy: -162952.0 ( -77.08 by residue)
QMean score : 0.576
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