Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDK-IDSNQDFVLFIGRISCPFCHLFVPKIVEVADED--EFELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNG-TI-KVKCDSKMTKEEIREFIG
1THX Chain:A ((2-103))
--------KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP------TTVKKYKVEGVPALRLVKGEQILDSTE-GVISK-DKLLSFLD
General information:
TITO was launched using:
RESULT:
Template:
1THX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64716 for 677 contacts (-95.6/contact) +
2D Compatibility (PS) -10314 + (NN) -2388 + (LL) 1464
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -83804.0 ( -123.79 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1THX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1THX-query.scw
PDB file :
Tito_Scwrl_1THX.pdb
: